Chain, Frédéric J.J.: search on Z-Library

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1

Genome-wide genotype-expression relationships reveal both copy number and single nucleotide differentiation contribute to differential gene expression between stickleback ecotypes

Huang, Yun, Feulner, Philine G D, Eizaguirre, Christophe, Lenz, Tobias L, Bornberg-Bauer, Erich, Milinski, Manfred, Reusch, Thorsten B H, Chain, Frédéric J J

Journal:

Genome Biology and Evolution

Year:

2019

Language:

english

File:

PDF, 2.32 MB

english, 2019

2

Reproducibility of pyrosequencing data for biodiversity assessment in complex communities

Zhan, Aibin, He, Song, Brown, Emily A., Chain, Frédéric J.J., Therriault, Thomas W., Abbott, Cathryn L., Heath, Daniel D., Cristescu, Melania E., MacIsaac, Hugh J., Faith, Daniel

Journal:

Methods in Ecology and Evolution

Year:

2014

Language:

english

File:

PDF, 395 KB

english, 2014

3

Variation in transcriptional responses to copper exposure across Daphnia pulex lineages

Chain, Frédéric J.J., Finlayson, Sarah, Crease, Teresa, Cristescu, Melania

Journal:

Aquatic Toxicology

Year:

2019

File:

PDF, 1.26 MB

2019

4

Spontaneous mutation accumulation in Daphnia pulex in selection-free versus competitive environments

Flynn, Jullien M., Chain, Frédéric J.J., Schoen, Daniel J., Cristescu, Melania E.

Journal:

Molecular Biology and Evolution

Year:

2016

Language:

english

File:

PDF, 1.20 MB

english, 2016

5

Decontamination of Sugar Syrup by Pulsed Light

Chaine, Aline, Levy, Caroline, Lacour, Bernard, Riedel, Christophe, Carlin, Frédéric

Journal:

Journal of Food Protection

Year:

2012

Language:

english

File:

PDF, 303 KB

english, 2012

6

Genome-wide genotype-expression relationships reveal both copy number and single nucleotide differentiation contribute to differential gene expression between stickleback ecotypes

Huang, Yun, Feulner, Philine G D, Eizaguirre, Christophe, Lenz, Tobias L, Bornberg-Bauer, Erich, Milinski, Manfred, Reusch, Thorsten B H, Chain, Frédéric J J

Journal:

Genome Biology and Evolution

Year:

2019

File:

PDF, 2.32 MB

2019

7

No consistent effects of humans on animal genetic diversity worldwide

Millette, Katie L., Fugère, Vincent, Debyser, Chloé, Greiner, Ariel, Chain, Frédéric J. J., Gonzalez, Andrew, Mooers, Arne

Journal:

Ecology Letters

Year:

2019

File:

PDF, 9.53 MB

2019

8

Toward accurate molecular identification of species in complex environmental samples: testing the performance of sequence filtering and clustering methods

Flynn, Jullien M., Brown, Emily A., Chain, Frédéric J. J., MacIsaac, Hugh J., Cristescu, Melania E.

Journal:

Ecology and Evolution

Year:

2015

Language:

english

File:

PDF, 568 KB

english, 2015

9

Divergence thresholds and divergent biodiversity estimates: can metabarcoding reliably describe zooplankton communities?

Brown, Emily A., Chain, Frédéric J. J., Crease, Teresa J., MacIsaac, Hugh J., Cristescu, Melania E.

Journal:

Ecology and Evolution

Year:

2015

Language:

english

File:

PDF, 693 KB

english, 2015

10

From Barcodes to Biomes: Special Issues from the 6th International Barcode of Life Conference

Adamowicz, Sarah J., Chain, Frédéric J.J., Clare, Elizabeth L., Deiner, Kristy, Dincă, Vlad, Elías-Gutiérrez, Manuel, Hausmann, Axel, Hogg, Ian D., Kekkonen, Mari, Lijtmaer, Darío A., Naaum, Amanda, S

Journal:

Year:

2016

Language:

english

File:

PDF, 107 KB

english, 2016

11

Optimization and performance testing of a sequence processing pipeline applied to detection of nonindigenous species

Scott, Ryan, Zhan, Aibin, Brown, Emily A., Chain, Frédéric J. J., Cristescu, Melania E., Gras, Robin, MacIsaac, Hugh J.

Journal:

Evolutionary Applications

Year:

2018

Language:

english

File:

PDF, 1.16 MB

english, 2018

12

bcgTree: automatized phylogenetic tree building from bacterial core genomes

Ankenbrand, Markus J., Keller, Alexander, Chain, Frédéric

Journal:

Year:

2016

File:

PDF, 2.11 MB

2016

13

The odds of duplicate gene persistence after polyploidization

Frédéric JJ Chain, Jonathan Dushoff, Ben J Evans

Journal:

Year:

2011

Language:

english

File:

PDF, 178 KB

english, 2011

14

Front Cover

Brown, Emily A., Chain, Frédéric J. J., Zhan, Aibin, MacIsaac, Hugh J., Cristescu, Melania E., Lowe, Andrew

Journal:

Diversity and Distributions

Year:

2016

Language:

english

File:

PDF, 1.91 MB

english, 2016

15

Extensive Copy-Number Variation of Young Genes across Stickleback Populations

Chain, Frédéric J. J., Feulner, Philine G. D., Panchal, Mahesh, Eizaguirre, Christophe, Samonte, Irene E., Kalbe, Martin, Lenz, Tobias L., Stoll, Monika, Bornberg-Bauer, Erich, Milinski, Manfred, Reus

Journal:

Year:

2014

Language:

english

File:

PDF, 1.14 MB

english, 2014

16

Fitness and Genomic Consequences of Chronic Exposure to Low Levels of Copper and Nickel in Daphnia pulex Mutation Accumulation Lines

Bull, James K., Flynn, Jullien M., Chain, Frederic J. J., Cristescu, Melania E.

Journal:

G3 Genes|Genome|Genetics

Year:

2018

Language:

english

File:

PDF, 1.00 MB

english, 2018

17

Duplicate gene evolution and expression in the wake of vertebrate allopolyploidization

Frédéric JJ Chain, Dora Ilieva, Ben J Evans

Journal:

BMC Evolutionary Biology

Year:

2008

Language:

english

File:

PDF, 870 KB

english, 2008

18

Multiple Mechanisms Promote the Retained Expression of Gene Duplicates in the Tetraploid Frog Xenopus laevis

Chain, Frédéric J. J., Evans, Ben J.

Journal:

Year:

2006

Language:

english

File:

PDF, 382 KB

english, 2006

19

Metabarcoding reveals strong spatial structure and temporal turnover of zooplankton communities among marine and freshwater ports

Chain, Frédéric J. J., Brown, Emily A., MacIsaac, Hugh J., Cristescu, Melania E., Cowie, Robert

Journal:

Diversity and Distributions

Year:

2016

Language:

english

File:

PDF, 834 KB

english, 2016

20

Genome-wide patterns of standing genetic variation in a marine population of three-spined sticklebacks

PHILINE G. D. FEULNER, FRÉDÉRIC J. J. CHAIN, MAHESH PANCHAL, CHRISTOPHE EIZAGUIRRE, MARTIN KALBE, TOBIAS L. LENZ, MARVIN MUNDRY, IRENE E. SAMONTE, MONIKA STOLL, MANFRED MILINSKI, THORSTEN B. H. REUSCH

Journal:

Molecular Ecology

Year:

2012

Language:

english

File:

PDF, 432 KB

english, 2012

21

Evolution of MHC class I genes in the endangered loggerhead sea turtle (Caretta caretta) revealed by 454 amplicon sequencing

Victor A Stiebens, Sonia E Merino, Frédéric J J Chain…

Journal:

BMC Evolutionary Biology

Year:

2013

Language:

english

File:

PDF, 456 KB

english, 2013

22

Genomic divergence between nine- and three-spined sticklebacks

Guo, Baocheng, Chain, Frédéric JJ, Bornberg-Bauer, Erich, Leder, Erica H, Merilä, Juha

Journal:

Year:

2013

Language:

english

File:

PDF, 428 KB

english, 2013

23

The Pipid Root

Adam J. Bewick, Frédéric J. J. Chain, Joseph Heled and Ben J. Evans

Journal:

Systematic Biology

Year:

2012

Language:

english

File:

PDF, 2.69 MB

english, 2012

24

Early detection of aquatic invaders using metabarcoding reveals a high number of non-indigenous species in Canadian ports

Brown, Emily A., Chain, Frédéric J. J., Zhan, Aibin, MacIsaac, Hugh J., Cristescu, Melania E., Lowe, Andrew

Journal:

Diversity and Distributions

Year:

2016

Language:

english

File:

PDF, 950 KB

english, 2016

25

Accelerated rates of large-scale mutations in the presence of copper and nickel

Chain, Frederic JJ, Flynn, Jullien M, Bull, James K, Cristescu, Melania E

Journal:

Genome Research

Year:

2018

Language:

english

File:

PDF, 2.60 MB

english, 2018

26

Metabarcoding using multiplexed markers increases species detection in complex zooplankton communities

Zhang, Guang K, Chain, Frédéric J J, Abbott, Cathryn L, Cristescu, Melania E

Journal:

Evolutionary Applications

Year:

2018

Language:

english

File:

PDF, 916 KB

english, 2018

27

No consistent effects of humans on animal genetic diversity worldwide

Millette, Katie L., Fugère, Vincent, Debyser, Chloé, Greiner, Ariel, Chain, Frédéric J. J., Gonzalez, Andrew, Mooers, Arne

Journal:

Ecology Letters

Year:

2019

Language:

english

File:

PDF, 9.53 MB

english, 2019

28

Transcriptome profiling of immune tissues reveals habitat-specific gene expression between lake and river sticklebacks

Huang, Yun, Chain, Frédéric J. J., Panchal, Mahesh, Eizaguirre, Christophe, Kalbe, Martin, Lenz, Tobias L., Samonte, Irene E., Stoll, Monika, Bornberg-Bauer, Erich, Reusch, Thorsten B. H., Milinski, M

Journal:

Molecular Ecology

Year:

2016

Language:

english

File:

PDF, 439 KB

english, 2016

29

The effects of parameter choice on defining molecular operational taxonomic units and resulting ecological analyses of metabarcoding data

Clare, Elizabeth, Chain, Frédéric Jeremiah Joseph, Littlefair, Joanne E, Cristescu, Melania E

Journal:

Year:

2016

Language:

english

File:

PDF, 694 KB

english, 2016

30

Genomics of Divergence along a Continuum of Parapatric Population Differentiation

Feulner, Philine G. D., Chain, Frédéric J. J., Panchal, Mahesh, Huang, Yun, Eizaguirre, Christophe, Kalbe, Martin, Lenz, Tobias L., Samonte, Irene E., Stoll, Monika, Bornberg-Bauer, Erich, Reusch, Tho

Journal:

Year:

2015

Language:

english

File:

PDF, 3.12 MB

english, 2015

31

Trends in DNA barcoding and metabarcoding

Adamowicz, Sarah J., Boatwright, James S., Chain, Frédéric, Fisher, Brian L., Hogg, Ian D., Leese, Florian, Lijtmaer, Darío A., Mwale, Monica, Naaum, Amanda M., Pochon, Xavier, Steinke, Dirk, Wilson,

Journal:

Year:

2019

Language:

english

File:

PDF, 93 KB

english, 2019

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